About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28175LEUCOKININ RECEPTOR-RELATED
Paelopatides28176-
Paelopatides28177-
Paelopatides28178-
Paelopatides28179PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides28180-
Paelopatides28181-
Paelopatides28182FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides28183SI:DKEY-256H2.1
Paelopatides281844-NITROPHENYLPHOSPHATASE-RELATED
Paelopatides281854-NITROPHENYLPHOSPHATASE-RELATED
Paelopatides28186-
Paelopatides28187LORICRIN
Paelopatides28188ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides281892-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED
Paelopatides28190-
Paelopatides28191CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28192CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides28193FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides28194-
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