About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides28283-
Paelopatides28284PROTEIN CBG26694
Paelopatides28285ENDONUCLEASE-RELATED
Paelopatides28286ENZYMATIC POLYPROTEIN-RELATED
Paelopatides28287PROTEIN CBG26694
Paelopatides28290SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN
Paelopatides28291FOLLISTATIN-RELATED
Paelopatides28292XAA-PRO AMINOPEPTIDASE 1
Paelopatides28293XAA-PRO AMINOPEPTIDASE 1
Paelopatides28294-
Paelopatides28295XAA-PRO AMINOPEPTIDASE 1
Paelopatides28296PROTEIN CBG26694
Paelopatides28297-
Paelopatides28298SULFOTRANSFERASE SULT
Paelopatides28299REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides28301ARYLSULFATASE
Paelopatides28302WD REPEAT CONTAINING PROTEIN 3 WDR3
Paelopatides28303-
Paelopatides28304ACTIN
Paelopatides28305-
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