About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29778PROTEIN LIN1
Paelopatides29779-
Paelopatides29780PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides29781TRANSMEMBRANE GTPASE FZO1
Paelopatides29782-
Paelopatides29783PROTEIN PHOSPHATASE
Paelopatides29784PROTEIN CBG26694
Paelopatides29785ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7
Paelopatides29786-
Paelopatides29787-
Paelopatides29788ACROSIN-RELATED
Paelopatides29789ACROSIN-RELATED
Paelopatides29790ACROSIN-RELATED
Paelopatides29791APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Paelopatides29792SI:CH211-262H13.3-RELATED-RELATED
Paelopatides29793-
Paelopatides29794ENZYMATIC POLYPROTEIN-RELATED
Paelopatides29795ENDONUCLEASE-RELATED
Paelopatides29796-
Paelopatides29797-
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