About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29818-
Paelopatides29821SCY1-RELATED S/T PROTEIN KINASE-LIKE
Paelopatides29822GLUCOKINASE REGULATORY PROTEIN
Paelopatides29823MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
Paelopatides29824-
Paelopatides29825POL PROTEIN
Paelopatides29826ENDONUCLEASE-RELATED
Paelopatides29827CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Paelopatides29828NUCLEAR PORE COMPLEX PROTEIN NUP155
Paelopatides29829ENDO BETA N-ACETYLGLUCOSAMINIDASE
Paelopatides29830RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED
Paelopatides29831EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP
Paelopatides29832SYNOVIAL SARCOMA, X MEMBER
Paelopatides29833-
Paelopatides29835SERINE/THREONINE-PROTEIN KINASE ATM
Paelopatides29836CS DOMAIN-CONTAINING PROTEIN
Paelopatides29837SERINE/THREONINE-PROTEIN KINASE ATM
Paelopatides29838-
Paelopatides29839-
Paelopatides29840INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
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