About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29671LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides29672CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides29673CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides29674EPM2A-INTERACTING PROTEIN 1
Paelopatides29675PROTEIN CBG26694
Paelopatides29676PARANEOPLASTIC ANTIGEN
Paelopatides29678-
Paelopatides29679CYTOCHROME P450 508A4-RELATED
Paelopatides29680CYTOCHROME P450 FAMILY 1
Paelopatides29681SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides29682REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29683CYTOCHROME P450 508A4-RELATED
Paelopatides29684CYTOCHROME P450 508A4-RELATED
Paelopatides29685CYTOCHROME P450 508A4-RELATED
Paelopatides29686CYTOCHROME P450 508A4-RELATED
Paelopatides29687CYTOCHROME P450 508A4-RELATED
Paelopatides29688ACROSIN-RELATED
Paelopatides29689ACROSIN-RELATED
Paelopatides29692REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29693E3 UBIQUITIN-PROTEIN LIGASE COP1
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