About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29649EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
Paelopatides29650TRANSCRIPTION FACTOR SPT20 HOMOLOG
Paelopatides29651SI:CH211-196P9.1-RELATED
Paelopatides29652GABA-B RECEPTOR
Paelopatides29653-
Paelopatides29654B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides29656REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29657DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED
Paelopatides29658-
Paelopatides29659AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides29660CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT BETA
Paelopatides29661REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29662-
Paelopatides29663-
Paelopatides29664INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides29666ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides29667-
Paelopatides29668-
Paelopatides29669NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides29670LD44813P
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