About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29881-
Paelopatides29882GAG-RELATED PROTEIN
Paelopatides29883NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides29884NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides29885BUCENTAUR RELATED
Paelopatides29886ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides29887-
Paelopatides298882-5 OLIGOADENYLATE SYNTHETASE
Paelopatides298892-5 OLIGOADENYLATE SYNTHETASE
Paelopatides29890-
Paelopatides29891PROTEIN CBG26694
Paelopatides29892ENZYMATIC POLYPROTEIN-RELATED
Paelopatides29893TORSIN
Paelopatides29894-
Paelopatides29895ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides29896REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29897REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29898BUCENTAUR RELATED
Paelopatides29899PROTEIN CBG26694
Paelopatides29900TGF-BETA FAMILY
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