About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides29901PROTEIN CBG26694
Paelopatides29902PROTEIN CBG26694
Paelopatides29903-
Paelopatides29904REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides29905BONUS, ISOFORM C-RELATED
Paelopatides29906RAN BINDING PROTEIN
Paelopatides29907MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Paelopatides29908GAG-RELATED PROTEIN
Paelopatides2990926S PROTEASOME REGULATORY SUBUNIT
Paelopatides2991026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8
Paelopatides29911CYTOCHROME C OXIDASE POLYPEPTIDE VIII
Paelopatides29912GLYCOSYL HYDROLASE
Paelopatides29913GLYCOSYL HYDROLASE
Paelopatides29914GLYCOSYL HYDROLASE
Paelopatides29915THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16
Paelopatides29916THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16
Paelopatides29917LIN52 FAMILY MEMBER
Paelopatides29918HL07962P-RELATED
Paelopatides29919-
Paelopatides29920ENDONUCLEASE-RELATED
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