About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30109-
Paelopatides30110LITHOSTATHINE
Paelopatides30111-
Paelopatides30112PROTEIN CBG26694
Paelopatides30113-
Paelopatides30114-
Paelopatides30115PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides30116ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides30117PROTEIN CBG26694
Paelopatides30118SUSHI DOMAIN-CONTAINING PROTEIN 1
Paelopatides30119RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides30120SERINE/THREONINE PROTEIN PHOSPHATASE
Paelopatides30121POL PROTEIN
Paelopatides30122ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30123ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides30124FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides30125-
Paelopatides30126UNCHARACTERIZED
Paelopatides30127TYROSINE-PROTEIN KINASE
Paelopatides30128-
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