About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides30088BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
Paelopatides30089BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
Paelopatides30090BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
Paelopatides30091-
Paelopatides30092TRANSPOSASE, PUTATIVE-RELATED
Paelopatides30093ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides30094ENDONUCLEASE-RELATED
Paelopatides30095ENZYMATIC POLYPROTEIN-RELATED
Paelopatides30096-
Paelopatides30097PARANEOPLASTIC ANTIGEN
Paelopatides30098-
Paelopatides30099COATOMER SUBUNIT DELTA
Paelopatides30100-
Paelopatides30101PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides30102-
Paelopatides30103-
Paelopatides30104-
Paelopatides30105-
Paelopatides30107REVERSE TRANSCRIPTASES
Paelopatides30108RETINOL DEHYDROGENASE-RELATED
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