About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31406-
Paelopatides31407POL PROTEIN
Paelopatides31408-
Paelopatides31409REVERSE TRANSCRIPTASE
Paelopatides31410-
Paelopatides31411PROTEIN FAM221A-RELATED
Paelopatides31412-
Paelopatides31413-
Paelopatides31414UNCHARACTERIZED
Paelopatides31415ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides31416PROTEIN CBG26694
Paelopatides31417-
Paelopatides31418CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31421-
Paelopatides31422KELCH DOMAIN-CONTAINING PROTEIN 10
Paelopatides31423REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31424-
Paelopatides31425-
Paelopatides31427DYSFERLIN-RELATED
Paelopatides31428CXC DOMAIN-CONTAINING PROTEIN-RELATED
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