About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides3146952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides31470ACTIN
Paelopatides31471URIDINE KINASE
Paelopatides31472DED DOMAIN-CONTAINING PROTEIN
Paelopatides31473HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides31474HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides31475EPM2A-INTERACTING PROTEIN 1
Paelopatides31476EPM2A-INTERACTING PROTEIN 1
Paelopatides31477-
Paelopatides31520-
Paelopatides31521-
Paelopatides31522-
Paelopatides31523REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31524DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Paelopatides31525-
Paelopatides31526-
Paelopatides31527-
Paelopatides31528EXPRESSED PROTEIN
Paelopatides31529-
Paelopatides31530TRANSMEMBRANE PROTEIN 181
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