About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31531PROTEIN CBG26694
Paelopatides31532-
Paelopatides31533INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Paelopatides31534NETRIN RECEPTOR UNC5
Paelopatides31535TESTICULAR SOLUBLE ADENYLYL CYCLASE
Paelopatides31536-
Paelopatides31537PIKACHURIN-LIKE PROTEIN
Paelopatides31538PIKACHURIN-LIKE PROTEIN
Paelopatides31539REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31540-
Paelopatides31541UNCHARACTERIZED
Paelopatides31542-
Paelopatides31543TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides31544PROTEIN CBG26694
Paelopatides31545-
Paelopatides31546-
Paelopatides31547MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides31548REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31549ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides31550ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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