About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31572ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31573-
Paelopatides31574N-ACYLNEURAMINATE-9-PHOSPHATASE
Paelopatides31575HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides31576-
Paelopatides31577DIPEPTIDYL PEPTIDASE III-RELATED
Paelopatides31578DIPEPTIDYL PEPTIDASE III-RELATED
Paelopatides31579N-ALPHA-ACETYLTRANSFERASE 20
Paelopatides31582S-ANTIGEN PROTEIN
Paelopatides31583PROTEIN CBG26694
Paelopatides31584SERINE PROTEASE INHIBITOR, SERPIN
Paelopatides31585-
Paelopatides31586COUNTIN RECEPTOR CNR3-RELATED
Paelopatides31587-
Paelopatides31588F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31589SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides31590HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides31591UNCHARACTERIZED
Paelopatides31592-
Paelopatides31593-
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