About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31788PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides31789TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides31790SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31791SULFOTRANSFERASE SULT
Paelopatides31792-
Paelopatides31793CENTROMERE/KINETOCHORE PROTEIN ZW10
Paelopatides31794-
Paelopatides31795PROTEIN B, PUTATIVE-RELATED-RELATED
Paelopatides31796ACID PHOSPHATASE-RELATED
Paelopatides31797PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides31798-
Paelopatides31799HOMEOBOX PROTEIN ROUGH-RELATED
Paelopatides31800TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides31801-
Paelopatides31802-
Paelopatides31803HL01030P-RELATED
Paelopatides31804NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides31805CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 157
Paelopatides31806CRUMBS FAMILY MEMBER
Paelopatides31807NACHT DOMAIN-CONTAINING PROTEIN
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