About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31808REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31809REVERSE TRANSCRIPTASE
Paelopatides31810SI:CH211-108C17.2-RELATED-RELATED
Paelopatides31811REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31812TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE
Paelopatides31813ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides31814RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides31815-
Paelopatides31816ALPHA- 1,3 -FUCOSYLTRANSFERASE
Paelopatides31817REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31818INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Paelopatides31820ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides31821-
Paelopatides31822-
Paelopatides31823SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31824IRE1-RELATED
Paelopatides3182552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides31826PROTEIN CBG26694
Paelopatides31827-
Paelopatides31828FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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