About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31655FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides31656-
Paelopatides31657-
Paelopatides31658-
Paelopatides31659FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides31660IMPORTIN-7, 8, 11
Paelopatides31661FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides31662-
Paelopatides31663TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides31664PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides31665-
Paelopatides31666PROTEIN DD3-3
Paelopatides31667PROTEIN DD3-3
Paelopatides31668-
Paelopatides31670PROTEIN DD3-3
Paelopatides31671PROTEIN DD3-3
Paelopatides31672FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides31673NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Paelopatides31675NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides31676-
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