About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31871GAG-RELATED PROTEIN
Paelopatides31872REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31873SI:CH211-108C17.2-RELATED-RELATED
Paelopatides31874VESICLE-TRAFFICKING PROTEIN SEC22B
Paelopatides31875-
Paelopatides31876-
Paelopatides31877PROTEIN CBG26694
Paelopatides31878REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31879-
Paelopatides31880TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE
Paelopatides31881-
Paelopatides31882ENDONUCLEASE
Paelopatides31883FARNESYLCYSTEINE LYASE
Paelopatides31884-
Paelopatides31885-
Paelopatides31886ENZYMATIC POLYPROTEIN-RELATED
Paelopatides31887-
Paelopatides31888FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides31889PROTEIN BARK BEETLE
Paelopatides31890REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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