About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31891MRNA EXPORT FACTOR AND BUB3
Paelopatides31892-
Paelopatides31893-
Paelopatides31894PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Paelopatides31895-
Paelopatides31896RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
Paelopatides31897FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides31898PROTEIN CBG26694
Paelopatides31902RAS-LIKE FAMILY MEMBER 11
Paelopatides31903REVERSE TRANSCRIPTASE
Paelopatides31904-
Paelopatides31905NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides31906-
Paelopatides31907OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides31908-
Paelopatides31909EPM2A-INTERACTING PROTEIN 1
Paelopatides31910EPM2A-INTERACTING PROTEIN 1
Paelopatides31911-
Paelopatides31912REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31913-
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