About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides31934ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED
Paelopatides31935ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED
Paelopatides319365-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides319375'-NUCLEOTIDASE-RELATED
Paelopatides31938-
Paelopatides31939-
Paelopatides31940CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides31941SIDESTEP PROTEIN
Paelopatides31942NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
Paelopatides31943GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
Paelopatides31944-
Paelopatides31945ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides31946-
Paelopatides31947-
Paelopatides31948PROTEIN CBG26694
Paelopatides31949ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides31950ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides31951MED-6-RELATED
Paelopatides31952REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides31953PROTEIN CBG12054-RELATED
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