About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32568ATP-DEPENDENT DNA HELICASE
Paelopatides32569GUANINE NUCLEOTIDE-BINDING PROTEIN G I /G S /G O GAMMA-13 SUBUNIT
Paelopatides32570ATP-DEPENDENT DNA HELICASE
Paelopatides32571FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides32572TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides32573-
Paelopatides32574ABC TRANSPORTER G FAMILY MEMBER 28
Paelopatides32575-
Paelopatides32576LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
Paelopatides32577LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
Paelopatides32578LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
Paelopatides32579-
Paelopatides32580-
Paelopatides32581COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17
Paelopatides32582-
Paelopatides32583OVARIAN CARCINOMA ANTIGEN CA125-RELATED
Paelopatides32584-
Paelopatides32585-
Paelopatides32586ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides32587T7-LIKE MITOCHONDRIAL DNA HELICASE
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