About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32488NUCLEAR HORMONE RECEPTOR
Paelopatides32489NUCLEAR HORMONE RECEPTOR HR3-RELATED
Paelopatides32490REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32491REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32492-
Paelopatides32493HOMEO BOX HB9 LIKE A-RELATED
Paelopatides32494SPLICING FACTOR YJU2
Paelopatides32495BUCENTAUR RELATED
Paelopatides32496TRANSMEMBRANE PROTEIN 69
Paelopatides32497-
Paelopatides32498VASCULIN
Paelopatides32499HISTONE H3 METHYLTRANSFERASE
Paelopatides32500-
Paelopatides32501CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Paelopatides32502REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32503CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Paelopatides32504CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32505-
Paelopatides32506-
Paelopatides3250752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
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