About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32528AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED
Paelopatides32529L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides32530AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED
Paelopatides32531NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Paelopatides32532MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides32533-
Paelopatides32534ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides32535ABL INTERACTOR FAMILY MEMBER
Paelopatides32536-
Paelopatides32537MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
Paelopatides32538ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides32539ZINC FINGER MATRIN-TYPE PROTEIN 3
Paelopatides32540ATP-DEPENDENT RNA HELICASE
Paelopatides32541SERINE/THREONINE-PROTEIN KINASE
Paelopatides32542-
Paelopatides32543-
Paelopatides32544DOUBLECORTIN DOMAIN CONTAINING 2
Paelopatides32545-
Paelopatides32546ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides32547L1 TRANSPOSABLE ELEMENT-RELATED
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