About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32814PARANEOPLASTIC ANTIGEN
Paelopatides32815-
Paelopatides32816UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER
Paelopatides32817-
Paelopatides32818SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides32819SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides32820-
Paelopatides32822PEPTIDYL-TRNA HYDROLASE 2
Paelopatides32824N-TERMINAL ACETYLTRANSFERASE-RELATED
Paelopatides32825N-TERMINAL ACETYLTRANSFERASE-RELATED
Paelopatides32826CELL DIVISION CYCLE 16,23,27
Paelopatides32827THIOPURINE S-METHYLTRANSFERASE
Paelopatides32828CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32829CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32830CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32831-
Paelopatides32832MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1
Paelopatides32833TP53-REGULATED INHIBITOR OF APOPTOSIS 1
Paelopatides32834UNCHARACTERIZED
Paelopatides32835REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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