About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32877EXPRESSED PROTEIN
Paelopatides32878TGF-BETA FAMILY
Paelopatides32879GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides32880GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides32881-
Paelopatides32882HEDGEHOG
Paelopatides32883CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides32884GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides32885ZINC FINGER AND SCAN DOMAIN-CONTAINING
Paelopatides32886-
Paelopatides32887PROTEIN CBG26694
Paelopatides32888PROTEIN CBG26694
Paelopatides32889PARANEOPLASTIC ANTIGEN
Paelopatides32890CARBOHYDRATE SULFOTRANSFERASE
Paelopatides32891CARBOHYDRATE SULFOTRANSFERASE
Paelopatides32892G-PROTEIN COUPLED RECEPTOR
Paelopatides32893PARAOXONASE
Paelopatides32894PREFOLDIN SUBUNIT 1-RELATED
Paelopatides32895-
Paelopatides32896PROTEIN KIAA0494
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