About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides32836BUCENTAUR RELATED
Paelopatides32837-
Paelopatides32838CONTACTIN 5
Paelopatides32839NETRIN RECEPTOR UNC5
Paelopatides32840-
Paelopatides32841-
Paelopatides32842SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides32843RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Paelopatides32844RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Paelopatides32845-
Paelopatides32846NETRIN/LAMININ-RELATED
Paelopatides32847REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides32848GTP-BINDING
Paelopatides32849GTP-BINDING
Paelopatides32850OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides32851MEIOSIS 1 ARREST PROTEIN
Paelopatides32852MEIOSIS 1 ARREST PROTEIN
Paelopatides32853-
Paelopatides32854-
Paelopatides32855ARYLSULFATASE
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