About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33004ATP-DEPENDENT DNA HELICASE
Paelopatides33005OPSIN
Paelopatides33006-
Paelopatides33007-
Paelopatides33008-
Paelopatides33009OPSIN
Paelopatides33010CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33011CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33012-
Paelopatides33013LYSOSOMAL ACID LIPASE-RELATED
Paelopatides33014-
Paelopatides33015-
Paelopatides33016TETRATRICOPEPTIDE REPEAT PROTEIN 14
Paelopatides33017GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides33018PSEUDOURIDYLATE SYNTHASE
Paelopatides33019DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides33020TRANSPOSON
Paelopatides33021OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides33022RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
Paelopatides33023DIMETHYLADENOSINE TRANSFERASE
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