About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33024METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN
Paelopatides33025DYNEIN INTERMEDIATE CHAIN
Paelopatides33026F-BOX ONLY PROTEIN 33
Paelopatides33027-
Paelopatides33028-
Paelopatides33029DUF853 DOMAIN-CONTAINING PROTEIN
Paelopatides33030-
Paelopatides33031-
Paelopatides33032-
Paelopatides33033PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides33034-
Paelopatides33035TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides33036-
Paelopatides33037FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33038FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33039-
Paelopatides33040HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides33041REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33042REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33043-
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