About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33463CRUMBS FAMILY MEMBER
Paelopatides33464-
Paelopatides33465ACROSIN-RELATED
Paelopatides33466VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides33467UNCHARACTERIZED
Paelopatides33468-
Paelopatides33469TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides33470ENDONUCLEASE-RELATED
Paelopatides33471INTIMAL THICKNESS RECEPTOR-RELATED
Paelopatides33472-
Paelopatides33473TRANSPOSABLE ELEMENT-RELATED
Paelopatides33474REVERSE TRANSCRIPTASES
Paelopatides33475UNCHARACTERIZED
Paelopatides33476REVERSE TRANSCRIPTASES
Paelopatides33477REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33478UNCHARACTERIZED
Paelopatides33479DNA2/NAM7 HELICASE FAMILY
Paelopatides33480DNA2/NAM7 HELICASE FAMILY
Paelopatides33481-
Paelopatides33482EGALITARIAN, ISOFORM B
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