About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33524UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Paelopatides33525PROTEIN CBG26694
Paelopatides33526ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33527GAG-RELATED PROTEIN
Paelopatides33528CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33529ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33530LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Paelopatides33531-
Paelopatides33532-
Paelopatides33533INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides33534REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides33535INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides33536-
Paelopatides33537ZINC FINGER AND BTB DOMAIN-CONTAINING
Paelopatides33538ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33539ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33540-
Paelopatides33541-
Paelopatides33543SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides33544-
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