About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides33503-
Paelopatides33504-
Paelopatides33505PROTEIN CBG26694
Paelopatides33506POL PROTEIN
Paelopatides33507PARANEOPLASTIC ANTIGEN
Paelopatides33508-
Paelopatides33509INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33510FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33511L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides33512ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides33513L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides33514-
Paelopatides33515CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides33516-
Paelopatides33517ENZYMATIC POLYPROTEIN-RELATED
Paelopatides33518FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33520SOLUTE CARRIER FAMILY 35 MEMBER B
Paelopatides33521CYTOCHROME P450 508A4-RELATED
Paelopatides33522FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides33523-
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