About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34388RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides34389METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides343901-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
Paelopatides34392ENZYMATIC POLYPROTEIN-RELATED
Paelopatides34393TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides34394SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides34395TRANSLATION INITIATION FACTOR EIF-2B
Paelopatides34396TRANSLATION INITIATION FACTOR EIF-2B
Paelopatides34397EPM2A-INTERACTING PROTEIN 1
Paelopatides34398ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides34399-
Paelopatides34400ATP-DEPENDENT CLP PROTEASE
Paelopatides34401REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Paelopatides34402SEC63 DOMAIN-CONTAINING
Paelopatides34403-
Paelopatides34404PROTEIN CBG26694
Paelopatides34405PROTEIN CBG26694
Paelopatides34406DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
Paelopatides34407PROTEIN CBG26694
Paelopatides34408FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
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