About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34285-
Paelopatides34286INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides34287REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides34288RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides34289BUCENTAUR RELATED
Paelopatides34290RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides34291ENOLASE
Paelopatides34292TYROSINE-PROTEIN KINASE
Paelopatides34293SLR5058 PROTEIN
Paelopatides34294ARSENITE-RESISTANCE PROTEIN 2
Paelopatides34295ARSENITE-RESISTANCE PROTEIN 2
Paelopatides34296PARANEOPLASTIC ANTIGEN
Paelopatides34297ENDONUCLEASE-RELATED
Paelopatides34298TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides34299-
Paelopatides34300-
Paelopatides34301ENZYMATIC POLYPROTEIN-RELATED
Paelopatides34302HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides34303TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides34304-
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