About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34450-
Paelopatides34451PROTEIN CBG26694
Paelopatides34452FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides34453CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34454ENDONUCLEASE-RELATED
Paelopatides34455ENDONUCLEASE-RELATED
Paelopatides34456CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34457ARYLSULFATASE FAMILY MEMBER
Paelopatides34458VESICULAR, OVEREXPRESSED IN CANCER, PROSURVIVAL PROTEIN 1
Paelopatides34459MONOACYLGLYCEROL LIPASE
Paelopatides34460THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Paelopatides34461PARANEOPLASTIC ANTIGEN
Paelopatides34462PROTEIN CBG26694
Paelopatides34463PROTEIN CBG26694
Paelopatides34464-
Paelopatides34465PROTEIN CBG26694
Paelopatides34466PROTEIN CBG26694
Paelopatides34467PROTEIN CBG26694
Paelopatides34468PROTEIN CBG26694
Paelopatides34469POL PROTEIN
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