About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34470ENDONUCLEASE-RELATED
Paelopatides34471NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
Paelopatides34472-
Paelopatides34473VWFC DOMAIN-CONTAINING PROTEIN
Paelopatides34474-
Paelopatides34475-
Paelopatides34476SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides34477SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides34478ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34480INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34481-
Paelopatides34482-
Paelopatides34483CDC45-RELATED PROTEIN
Paelopatides34484UNCHARACTERIZED
Paelopatides34485-
Paelopatides34486BETA-TUBULIN COFACTOR D
Paelopatides34487ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34488-
Paelopatides34489ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34490DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
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