About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34491-
Paelopatides34492NF-KAPPA-B INHIBITOR ALPHA
Paelopatides34493EPM2A-INTERACTING PROTEIN 1
Paelopatides34494-
Paelopatides34495PROTEIN CBG26694
Paelopatides34497-
Paelopatides34498ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34499SEPIAPTERIN REDUCTASE
Paelopatides34500-
Paelopatides34501G-PROTEIN COUPLED RECEPTOR
Paelopatides34502-
Paelopatides34503-
Paelopatides34504FACIOGENITAL DYSPLASIA PROTEIN
Paelopatides34505-
Paelopatides34506EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides34507PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides34508-
Paelopatides34509CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26
Paelopatides34510TRANSPOSABLE ELEMENT-RELATED
Paelopatides34511TRANSPOSABLE ELEMENT-RELATED
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