About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34951B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides34952-
Paelopatides34953LONG-CHAIN-FATTY-ACID--COA LIGASE
Paelopatides34954COMM DOMAIN CONTAINING PROTEIN 10
Paelopatides34956-
Paelopatides34957-
Paelopatides34958POL PROTEIN
Paelopatides34959ZGC:101858
Paelopatides34960TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides34961-
Paelopatides34962-
Paelopatides34963-
Paelopatides34964CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER
Paelopatides34965BUCENTAUR RELATED
Paelopatides34966-
Paelopatides34967MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides34968ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides34969-
Paelopatides34970PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides34971REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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