About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34972REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides34973-
Paelopatides34974-
Paelopatides34975INNER MEMBRANE TRANSPORT PROTEIN YAJR
Paelopatides34976L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides34977-
Paelopatides34978NETRIN RECEPTOR UNC5
Paelopatides34979-
Paelopatides34980CONSORTIN
Paelopatides34981S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides34982ENZYMATIC POLYPROTEIN-RELATED
Paelopatides34983-
Paelopatides34984-
Paelopatides34985-
Paelopatides34986ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides34987-
Paelopatides34988-
Paelopatides34989CASEIN KINASE-RELATED
Paelopatides34990UPF0315 PROTEIN-RELATED
Paelopatides34991-
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