About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34868PROTEIN TINCAR
Paelopatides34869-
Paelopatides34870-
Paelopatides34871-
Paelopatides34872-
Paelopatides34873-
Paelopatides34874EG:EG0003.4 PROTEIN-RELATED
Paelopatides34875-
Paelopatides34876-
Paelopatides34877TRANSPOSASE, PUTATIVE-RELATED
Paelopatides34878TRANSPOSASE, PUTATIVE-RELATED
Paelopatides34879BETA1,3-GALACTOSYLTRANSFERASE
Paelopatides34880BETA1,3-GALACTOSYLTRANSFERASE
Paelopatides34881CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34882CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34883CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides34884-
Paelopatides34885ODD-SKIPPED - RELATED
Paelopatides34886BTB DOMAIN-CONTAINING PROTEIN
Paelopatides34887-
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