About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides34846FROUNT PROTEIN-RELATED
Paelopatides34847EPM2A-INTERACTING PROTEIN 1
Paelopatides34848PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides34849ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides34850GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides34851GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides34852-
Paelopatides34853-
Paelopatides34855-
Paelopatides34856-
Paelopatides34857-
Paelopatides34858-
Paelopatides34859BYSTIN
Paelopatides34860-
Paelopatides348615-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides34862AMINOTRANSFERASE CLASS III
Paelopatides34863-
Paelopatides34864-
Paelopatides34865-
Paelopatides34867REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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