About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35053PROHIBITIN
Paelopatides35054PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Paelopatides35055-
Paelopatides35056-
Paelopatides35057-
Paelopatides35059OTU DOMAIN CONTAINING PROTEIN
Paelopatides35060-
Paelopatides35061SPERM ASSOCIATED ANTIGEN 7
Paelopatides35062RFWD3 PROTEIN
Paelopatides35063O-ACYLTRANSFERASE
Paelopatides35064O-ACYLTRANSFERASE
Paelopatides35065HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides35066-
Paelopatides35067TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides35068HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides35076CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN
Paelopatides35077TRANSLATION FACTOR
Paelopatides35078-
Paelopatides35079MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides35080-
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