About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35101MRN COMPLEX-INTERACTING PROTEIN
Paelopatides35102LIPASE
Paelopatides35103-
Paelopatides35104ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
Paelopatides35105CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN
Paelopatides35106-
Paelopatides35107UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED
Paelopatides35108UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED
Paelopatides35109PEPTIDE CHAIN RELEASE FACTOR
Paelopatides35110-
Paelopatides35111-
Paelopatides35112SCHWANNOMIN INTERACTING PROTEIN 1
Paelopatides35113SCHWANNOMIN INTERACTING PROTEIN 1
Paelopatides35114CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN
Paelopatides35115STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
Paelopatides35116STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
Paelopatides35117-
Paelopatides35118-
Paelopatides35119-
Paelopatides35120-
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