About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35161MUCIN-22
Paelopatides35162ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4
Paelopatides35163FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35164FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35165FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35166FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35167MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Paelopatides35168CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
Paelopatides35169-
Paelopatides35170FI04643P-RELATED
Paelopatides35171GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides35172ENDONUCLEASE-RELATED
Paelopatides35173REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides35174SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Paelopatides35175-
Paelopatides35176-
Paelopatides35177-
Paelopatides35178NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides35179-
Paelopatides35180UNCHARACTERIZED
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