About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35181-
Paelopatides35182-
Paelopatides35183SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides35184-
Paelopatides35185NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides35186SI:CH211-196P9.1-RELATED
Paelopatides35187ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35188REVERSE TRANSCRIPTASES
Paelopatides35189SMAD
Paelopatides351905'-NUCLEOTIDASE-RELATED
Paelopatides35191LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1
Paelopatides35192HEAT SHOCK REGULATED 2
Paelopatides35193EUKARYOTIC TRANSLATION INITIATION FACTOR
Paelopatides35194MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
Paelopatides35195MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
Paelopatides35196SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
Paelopatides35197-
Paelopatides35198SERINE/THREONINE-PROTEIN KINASE NEK
Paelopatides35199GABA-B RECEPTOR
Paelopatides35200TYROSINE-PROTEIN KINASE RECEPTOR
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