About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35352-
Paelopatides35353N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
Paelopatides35354-
Paelopatides35355N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER
Paelopatides35356-
Paelopatides35357BRCA1-ASSOCIATED ATM ACTIVATOR 1
Paelopatides35358PEFLIN
Paelopatides35359-
Paelopatides35360UNCHARACTERIZED
Paelopatides35361UNCHARACTERIZED
Paelopatides35362CYTOCHROME B-245 CHAPERONE 1
Paelopatides35363-
Paelopatides35364ZINC FINGER PROTEIN 207
Paelopatides35365-
Paelopatides35366DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
Paelopatides35367BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1
Paelopatides35368-
Paelopatides35369PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12
Paelopatides35370-
Paelopatides35371GALACTOSE-3-O-SULFOTRANSFERASE
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