About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35308-
Paelopatides35309PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Paelopatides35310TRANSGELIN
Paelopatides35311MCG131172, ISOFORM CRA_A
Paelopatides35312-
Paelopatides35313-
Paelopatides35314-
Paelopatides35315-
Paelopatides35316SI:CH211-108C17.2-RELATED-RELATED
Paelopatides35317-
Paelopatides35321EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
Paelopatides35322HISTIDYL-TRNA SYNTHETASE
Paelopatides35323-
Paelopatides35324L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides35325DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Paelopatides35326DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
Paelopatides35327SENSOR KINASE-RELATED
Paelopatides35328MULTICOPPER OXIDASE-RELATED
Paelopatides35329REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides35330-
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