About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35288-
Paelopatides35289TRANSPOSON
Paelopatides35290CYSTEINYL-TRNA SYNTHETASE
Paelopatides35291CYSTEINYL-TRNA SYNTHETASE
Paelopatides35292-
Paelopatides35293-
Paelopatides35294-
Paelopatides35295CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Paelopatides35296UNCHARACTERIZED
Paelopatides35297-
Paelopatides35298-
Paelopatides35299PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides35300-
Paelopatides35301-
Paelopatides35302-
Paelopatides35303SI:CH211-196P9.1-RELATED
Paelopatides35304-
Paelopatides35305EPM2A-INTERACTING PROTEIN 1
Paelopatides35306RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Paelopatides35307RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
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