About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35514-
Paelopatides35515N-ACETYLGLUCOSAMINYLTRANSFERASE VI
Paelopatides35516-
Paelopatides35517COUNTIN RECEPTOR CNR3-RELATED
Paelopatides35518GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides35519-
Paelopatides35520OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides35521LD33804P
Paelopatides35522SI:CH211-196P9.1-RELATED
Paelopatides35523ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides35524IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides35525BUCENTAUR RELATED
Paelopatides35526-
Paelopatides35527L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides35528RING FINGER PROTEIN 31-RELATED
Paelopatides35529PROTEIN CBG26694
Paelopatides35530-
Paelopatides35531PROTEIN MMS22-LIKE
Paelopatides35532REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides35533SYNAPTIC ADHESION-LIKE MOLECULE SALM
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