About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35554-
Paelopatides35555-
Paelopatides35556NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides35557DNA REPAIR PROTEIN RAD51 HOMOLOG 2
Paelopatides35558-
Paelopatides35559-
Paelopatides35560DNA REPAIR PROTEIN RAD51 HOMOLOG 2
Paelopatides35561ENOYL-COA HYDRATASE-RELATED
Paelopatides35562ENOYL-COA HYDRATASE-RELATED
Paelopatides35563FRIZZLED
Paelopatides35564ALANYL-TRNA SYNTHETASE
Paelopatides35565-
Paelopatides35566-
Paelopatides35567-
Paelopatides35568TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides35569-
Paelopatides35570PROTEIN CBG26694
Paelopatides35571PARANEOPLASTIC ANTIGEN
Paelopatides35572PROTEIN PHOSPHATASE 4 REGULATORY SUBUNIT 4 PPP4R4
Paelopatides35573ZINC FINGER AND BTB DOMAIN-CONTAINING
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