About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides35473UNCHARACTERIZED
Paelopatides35474TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides35475REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides35476-
Paelopatides35477PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Paelopatides35478PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Paelopatides35479-
Paelopatides35480-
Paelopatides35481FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides35482E3 UBIQUITIN-PROTEIN LIGASE TRIM
Paelopatides35483BONUS, ISOFORM C-RELATED
Paelopatides35484ZGC:174356
Paelopatides35485N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides35486SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35487SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35488SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides35489U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3
Paelopatides35490HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides35491ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides35492METALLOPHOSPHOESTERASE
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